Molecular phylogenetic analyses of three Synechococcus strains isolated from seawater near the Ieodo Ocean Research Station
SCOPUS
KCI
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Title
- Molecular phylogenetic analyses of three Synechococcus strains isolated from seawater near the Ieodo Ocean Research Station
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Author(s)
- Choi, D.H.; Noh, J.H.
- KIOST Author(s)
- Choi, Dong Han(최동한)
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Alternative Author(s)
- 최동한; 노재훈
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Publication Year
- 2006
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Abstract
- Three Synechococcus strains were isolated from seawater near the Ieodo Ocean Research Station (IORS), and their 16S rDNA genes and the internal transcribed spacer (ITS) between the 16S and 23S rRNA genes were sequenced to investigate their phylogenetic relationships. Phylogenetic trees based on the 16S rDNA and ITS sequences showed that they clustered in the main MC-A Synechococcus group (subcluster 5.1), but formed branches differentiating them from the described clades. As the IORS is located in an area affected by diverse water masses, high Synechococcus diversity is expected in the area. Therefore, the IORS might be a good site to study the diversity, physiology, and distribution of the Synechococcus group.
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ISSN
- 1738-5261
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URI
- https://sciwatch.kiost.ac.kr/handle/2020.kiost/40494
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DOI
- 10.1007/BF03020633
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Bibliographic Citation
- Ocean Science Journal, v.41, no.4, pp.315 - 318, 2006
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Publisher
- Korea Ocean Research and Development Institute
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Subject
- genetic analysis; molecular analysis; phylogenetics; physiology; RNA; seawater; species diversity; strain; Synechococcus
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Keywords
- 16S rRNA; Ieodo; ITS gene; Phylogeney; Synechococcus
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Type
- Article
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Language
- English
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Document Type
- Article
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