Population genetic structure and demographic history of the fat greenling Hexagrammos otakii SCIE SCOPUS KCI

DC Field Value Language
dc.contributor.author Habib, Kazi Ahsan -
dc.contributor.author Jeong, Dageum -
dc.contributor.author Myoung, Jung-Goo -
dc.contributor.author Kim, Min Seok -
dc.contributor.author Jang, Yo Soon -
dc.contributor.author Shim, Jae Seol -
dc.contributor.author Lee, Youn-Ho -
dc.date.accessioned 2020-04-20T07:43:39Z -
dc.date.available 2020-04-20T07:43:39Z -
dc.date.created 2020-01-28 -
dc.date.issued 2011-08 -
dc.identifier.issn 1976-9571 -
dc.identifier.uri https://sciwatch.kiost.ac.kr/handle/2020.kiost/3841 -
dc.description.abstract Fat greenling (Hexagrammos otakii) is an important commercial fish in the Northwestern Pacific, being distributed along the coastal waters of the East/Japan Sea and the Yellow Sea. To investigate population genetic structure and demographic history of this species, one hundred and fifty five individuals were collected from five localities in the distribution range of the species and sequence variations in the mitochondrial genes COI, COIII-ND3-ND4L, and cytochrome b were examined. For all the genes in every sampling location, the nucleotide diversities were very low (0.001 similar to 0.005) although the haplotype diversities were relatively high, 0.55 similar to 0.81 for COI, 0.79 similar to 0.84 for COIII-ND3-ND4L, and 0.95 similar to 0.97 for cytochrome b. Hierarchical analysis of molecular variance (AMOVA), the conventional population statistic FST, and exact test of population differentiation revealed no significant genetic structuring among the samples, indicating that fat greening is panmictic throughout the range of its distribution. Neutrality tests such as Tajima's D and Fu's FS statistics and mismatch distribution analyses suggested that fat greening has undergone the demographic history of population expansion during the late Pleistocene period approximately 91,000 similar to 327,000 years ago. The star-burst patterns of haplotype networks and low nucleotide diversities also indicated recent population expansion. These results help establish the fisheries management strategy for fat greenling in the Northwestern Pacific. -
dc.description.uri 1 -
dc.language English -
dc.publisher SPRINGER -
dc.subject DNA-SEQUENCE VARIATION -
dc.subject EAST CHINA SEA -
dc.subject ANCHOVY ENGRAULIS-JAPONICUS -
dc.subject MITOCHONDRIAL-DNA -
dc.subject NORTH PACIFIC -
dc.subject ATLANTIC COD -
dc.subject YELLOW SEA -
dc.subject CLIMATE -
dc.subject FISH -
dc.subject HAPLOTYPES -
dc.title Population genetic structure and demographic history of the fat greenling Hexagrammos otakii -
dc.type Article -
dc.citation.endPage 423 -
dc.citation.startPage 413 -
dc.citation.title GENES & GENOMICS -
dc.citation.volume 33 -
dc.citation.number 4 -
dc.contributor.alternativeName Habib -
dc.contributor.alternativeName 정다금 -
dc.contributor.alternativeName 명정구 -
dc.contributor.alternativeName 김민석 -
dc.contributor.alternativeName 장요순 -
dc.contributor.alternativeName 심재설 -
dc.contributor.alternativeName 이윤호 -
dc.identifier.bibliographicCitation GENES & GENOMICS, v.33, no.4, pp.413 - 423 -
dc.identifier.doi 10.1007/s13258-011-0059-4 -
dc.identifier.scopusid 2-s2.0-80052636667 -
dc.identifier.wosid 000294348900013 -
dc.type.docType Article -
dc.identifier.kciid ART001579753 -
dc.description.journalClass 1 -
dc.subject.keywordPlus DNA-SEQUENCE VARIATION -
dc.subject.keywordPlus EAST CHINA SEA -
dc.subject.keywordPlus ANCHOVY ENGRAULIS-JAPONICUS -
dc.subject.keywordPlus MITOCHONDRIAL-DNA -
dc.subject.keywordPlus NORTH PACIFIC -
dc.subject.keywordPlus ATLANTIC COD -
dc.subject.keywordPlus YELLOW SEA -
dc.subject.keywordPlus CLIMATE -
dc.subject.keywordPlus FISH -
dc.subject.keywordPlus HAPLOTYPES -
dc.subject.keywordAuthor Fat greenling -
dc.subject.keywordAuthor Population -
dc.subject.keywordAuthor Demographic history -
dc.subject.keywordAuthor Pleistocene expansion -
dc.relation.journalWebOfScienceCategory Biochemistry & Molecular Biology -
dc.relation.journalWebOfScienceCategory Biotechnology & Applied Microbiology -
dc.relation.journalWebOfScienceCategory Genetics & Heredity -
dc.description.journalRegisteredClass scie -
dc.description.journalRegisteredClass scopus -
dc.description.journalRegisteredClass kci -
dc.relation.journalResearchArea Biochemistry & Molecular Biology -
dc.relation.journalResearchArea Biotechnology & Applied Microbiology -
dc.relation.journalResearchArea Genetics & Heredity -
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East Sea Research Institute > East Sea Environment Research Center > 1. Journal Articles
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