Thermococcus onnurineus NA1: a Lithoheterotroph as Revealed by Genome Analysis

DC Field Value Language
dc.contributor.author 이현숙 -
dc.contributor.author 강성균 -
dc.contributor.author 배승섭 -
dc.contributor.author 임재규 -
dc.contributor.author 이정현 -
dc.contributor.author 김윤재 -
dc.contributor.author 전정호 -
dc.contributor.author 차선신 -
dc.contributor.author 권개경 -
dc.contributor.author 김상진 -
dc.date.accessioned 2020-07-17T01:50:56Z -
dc.date.available 2020-07-17T01:50:56Z -
dc.date.created 2020-02-11 -
dc.date.issued 2008-05-15 -
dc.identifier.uri https://sciwatch.kiost.ac.kr/handle/2020.kiost/30045 -
dc.description.abstract A Lithoheterotroph pathway of hyperthermophilic marine archaea Thermococcus onnurineus was revealed by Genome Analysis. To provide some insight into factors that contributed to the apparent successful competition of Thermococcus spp. in hydrothermal vent fields, the genome sequence of T. onnurineus NA1 was determined by combining random whole-genome shotgun sequencing with pyrosequencing. As a result, it was revealed that T. onnurineus NA1 has a single circular chromosome (1,847,607 bp) without any exochromosomal elemnets, and a total of 1,976 coding DNA sequences (CDSs) were identified. Synteny comparison by blastp-all-va-all between T. onnurineus NA1 and other Thermococcales strains confirmed the high frequency of DNA rearrangement. The gene rearrangement between T.onnurineus NA1 and T. kodakaraensis KOD1 seemed to take place at the level of chromosomal segments, confirming more close phylogenetic relationship than to other Pyrococcus strains. Interestingly, we found that T. onnurineus NA1 retained the metabolic pathways not only for organotrophic growth but also for lithotrophic growth by analyzing the genome sequence. -
dc.description.uri 2 -
dc.language English -
dc.publisher 한국미생물학회 -
dc.relation.isPartOf the 48th MSK Annual Meetion and 2008 international Symposium on Microbiology -
dc.title Thermococcus onnurineus NA1: a Lithoheterotroph as Revealed by Genome Analysis -
dc.type Conference -
dc.citation.conferencePlace KO -
dc.citation.endPage 120 -
dc.citation.startPage 119 -
dc.citation.title the 48th MSK Annual Meetion and 2008 international Symposium on Microbiology -
dc.contributor.alternativeName 이현숙 -
dc.contributor.alternativeName 강성균 -
dc.contributor.alternativeName 배승섭 -
dc.contributor.alternativeName 임재규 -
dc.contributor.alternativeName 이정현 -
dc.contributor.alternativeName 김윤재 -
dc.contributor.alternativeName 전정호 -
dc.contributor.alternativeName 차선신 -
dc.contributor.alternativeName 권개경 -
dc.contributor.alternativeName 김상진 -
dc.identifier.bibliographicCitation the 48th MSK Annual Meetion and 2008 international Symposium on Microbiology, pp.119 - 120 -
dc.description.journalClass 2 -
Appears in Collections:
Marine Resources & Environment Research Division > Marine Biotechnology &Bioresource Research Department > 2. Conference Papers
Files in This Item:
There are no files associated with this item.

qrcode

Items in ScienceWatch@KIOST are protected by copyright, with all rights reserved, unless otherwise indicated.

Browse