Genomic Properties of Polycyclic Aromatic Hydrocarbon Degrading Marine Bacterium Novosphingobium pentaromativorans US6-1
DC Field | Value | Language |
---|---|---|
dc.contributor.author | 권용민 | - |
dc.contributor.author | 최동희 | - |
dc.contributor.author | 권개경 | - |
dc.contributor.author | 김상진 | - |
dc.date.accessioned | 2020-07-15T22:32:48Z | - |
dc.date.available | 2020-07-15T22:32:48Z | - |
dc.date.created | 2020-02-11 | - |
dc.date.issued | 2016-02-01 | - |
dc.identifier.uri | https://sciwatch.kiost.ac.kr/handle/2020.kiost/24960 | - |
dc.description.abstract | Novosphingobium pentaromativorans US6-1T is one of the potent microorganisms could degrade PAHs including highly toxic benzo[a]pyrene. To further understand the PAH biodegradation pathways, obtain a complete genome using Illumina MiSeq and PacBio platform. The genome of strain US6-1T consists of 5,457,578 bp, which includes the 3,979,506 bp chromosome and five megaplasmids. Strain US6-1T has two different extradiol pathways and genes involved in catechol 2,3-dioxygenase pathway coded in plasmid pLA1 and those of protocatechuate 4,5-dioxygenase pathway coding genes located in pLA3. Still regulation mechanisms of genes coded in different region and genes involved in initial ring-opening process are not clear. Further researches are required for unveiling the full pathway of high-molecular-mass aromatic hydrocarbon degradation, its regulation mechanism etc.PacBio platform. The genome of strain US6-1T consists of 5,457,578 bp, which includes the 3,979,506 bp chromosome and five megaplasmids. Strain US6-1T has two different extradiol pathways and genes involved in catechol 2,3-dioxygenase pathway coded in plasmid pLA1 and those of protocatechuate 4,5-dioxygenase pathway coding genes located in pLA3. Still regulation mechanisms of genes coded in different region and genes involved in initial ring-opening process are not clear. Further researches are required for unveiling the full pathway of high-molecular-mass aromatic hydrocarbon degradation, its regulation mechanism etc. | - |
dc.description.uri | 2 | - |
dc.language | English | - |
dc.publisher | 한국유전체학회 | - |
dc.relation.isPartOf | 제 12회 한국유전체학회 동계 심포지움 2016 | - |
dc.title | Genomic Properties of Polycyclic Aromatic Hydrocarbon Degrading Marine Bacterium Novosphingobium pentaromativorans US6-1 | - |
dc.type | Conference | - |
dc.citation.conferencePlace | KO | - |
dc.citation.endPage | 95 | - |
dc.citation.startPage | 95 | - |
dc.citation.title | 제 12회 한국유전체학회 동계 심포지움 2016 | - |
dc.contributor.alternativeName | 권용민 | - |
dc.contributor.alternativeName | 권개경 | - |
dc.contributor.alternativeName | 김상진 | - |
dc.identifier.bibliographicCitation | 제 12회 한국유전체학회 동계 심포지움 2016, pp.95 | - |
dc.description.journalClass | 2 | - |