Metagenomic characterization of viral communities in Goseong Bay, Korea

DC Field Value Language
dc.contributor.author 박소윤 -
dc.contributor.author 황진익 -
dc.contributor.author 이택견 -
dc.date.accessioned 2020-07-15T19:33:30Z -
dc.date.available 2020-07-15T19:33:30Z -
dc.date.created 2020-02-11 -
dc.date.issued 2016-11-04 -
dc.identifier.uri https://sciwatch.kiost.ac.kr/handle/2020.kiost/24376 -
dc.description.abstract In this study, seawater samples were collected from Goseong Bay, Korea in March 2014 and viral populations were examined by metagenomics assembly. Enrichment of marine viral particles using FeCl3 followed by next-generation sequencing produced numerous sequences. De novo assembly and BLAST search showed that most of obtained contigs were unknown sequences and only 0.74% sequences were associated with known viruses. As a result, 138 viruses, including bacteriophages (87%), viruses infecting algae and others (13%) were identified. The identified 138 viruses were divided into 11 orders, 14 families, 34 genera, and 133 species. The dominant viruses were Pelagibacter phage HTVC010P and Roseobacter phage SIO1. The viruses infecting algae, including the Ostreococcus species, accounted for 9.4% of total identified viruses. In addition, we identified pathogenic herpes viruses infecting fishes and giant viruses infecting parasitic acanthamoeba species. This is the comprehensive study to reveal the viral populations in the Goseong Bay using metagenomics. The information associated with the marine viral community in Goseong Bay, Korea will be useful for comparative analysis in other marine viral communities. -
dc.description.uri 1 -
dc.language English -
dc.publisher The Korean Sciety of Virology -
dc.relation.isPartOf International Meeting of the Federation of Korean Microbiological Societies -
dc.title Metagenomic characterization of viral communities in Goseong Bay, Korea -
dc.type Conference -
dc.citation.conferencePlace KO -
dc.citation.endPage 246 -
dc.citation.startPage 246 -
dc.citation.title International Meeting of the Federation of Korean Microbiological Societies -
dc.contributor.alternativeName 박소윤 -
dc.contributor.alternativeName 황진익 -
dc.contributor.alternativeName 이택견 -
dc.identifier.bibliographicCitation International Meeting of the Federation of Korean Microbiological Societies, pp.246 -
dc.description.journalClass 1 -
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