Complete mitochondrial genome of Sebastes steindachneri (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea

Title
Complete mitochondrial genome of Sebastes steindachneri (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea
Author(s)
장요순; 이은경; Jeong-Ho Park; Ki-Yong Kim; 김성
KIOST Author(s)
Lee, Eun Kyung(이은경)Kim, Sung(김성)
Publication Year
2015-12-31
Abstract
Sebastes is a diverse genus of fish in the family Scorpaenidae. The larvae and adults in thisgenus have similar morphological characteristics. To obtain basic information for theiridentification, the mitogenome of S. steindachneri was sequenced using next-generationsequencing. The mitogenome was 16,450 bp in length, and comprised of 13 protein-codinggenes (PCGs), 2 rRNAs, 22 tRNAs, and a control region. The mitogenome is 27.4% A, 21.1% T,17.5% G, and 28.0% C, showing a slight AT bias (54.5%). ATG was the start codon in all of thePCGs, except COX1 (GTG). The termination codon in the PCGs was TAA, except in ND1 and ND3(TAG), ND4 (AGA), and Cytb (incomplete termination codon, T). All of the tRNAs had a typicalcloverleaf shape, except tRNASer(AGY), which lacked the DHU arm. The mitogenome of S.steindachneri should be useful for identifying larvae and constructing a phylogenetic structurefor the Scorpaenidae.equenced using next-generationsequencing. The mitogenome was 16,450 bp in length, and comprised of 13 protein-codinggenes (PCGs), 2 rRNAs, 22 tRNAs, and a control region. The mitogenome is 27.4% A, 21.1% T,17.5% G, and 28.0% C, showing a slight AT bias (54.5%). ATG was the start codon in all of thePCGs, except COX1 (GTG). The termination codon in the PCGs was TAA, except in ND1 and ND3(TAG), ND4 (AGA), and Cytb (incomplete termination codon, T). All of the tRNAs had a typicalcloverleaf shape, except tRNASer(AGY), which lacked the DHU arm. The mitogenome of S.steindachneri should be useful for identifying larvae and constructing a phylogenetic structurefor the Scorpaenidae.
URI
https://sciwatch.kiost.ac.kr/handle/2020.kiost/20512
Bibliographic Citation
Mitochondrial DNA, pp.1 - 3, 2015
Publisher
Informa
Type
Conference
Language
English
Publisher
Informa
Related Researcher
Research Interests

Fish ecology,Eggs & larval fish identification,어류 생태연구,난자치어 형태분류

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