Molecular cloning and characterization of a novel cold-active beta-1,4-D-mannanase from the Antarctic springtail, Cryptopygus antarcticus SCIE SCOPUS

DC Field Value Language
dc.contributor.author Song, Jung Min -
dc.contributor.author Nam, Ki-Woong -
dc.contributor.author Kang, Sung Gyun -
dc.contributor.author Kim, Choong-Gon -
dc.contributor.author Kwon, Suk-Tae -
dc.contributor.author Lee, Youn-Ho -
dc.date.accessioned 2020-04-20T10:40:28Z -
dc.date.available 2020-04-20T10:40:28Z -
dc.date.created 2020-01-28 -
dc.date.issued 2008-09 -
dc.identifier.issn 1096-4959 -
dc.identifier.uri https://sciwatch.kiost.ac.kr/handle/2020.kiost/4457 -
dc.description.abstract A cDNA encoding a beta-1,4-D-mannanase (CaMan) was identified among the expressed sequence tags (ESTs) of the Antarctic springtail, Ctyptopygus antarcticus. The open reading frame consisted of 1149 bp encoding 382 amino acids with a putative signal peptide. Amino acid sequence comparison with other mannanases indicated that CaMan likely belongs to subfamily 10 of the glycoside hydrolase family 5, together with mollusc beta-mannanases. CaMan shows typical features of a cold-active enzyme: it has a high frequency of polar residues such as Asn, Gln, and Ser, and a low frequency of hydrophobic residues as well as a low ratio of Arg/(Arg+Lys) compared to the mesophilic beta-mannanases. When CaMan was fused with the thioredoxin gene in pET-32a(+), expressed in E. coli Rosetta-gami (DE3), and purified after thrombin treatment, catalytically active enzyme was obtained. CaMan has high specific activity (416.3 U/mg) toward locust bean gum at an optimal temperature of 30 degrees C and an optimal pH of 3.5. Its optimal temperature is the lowest among those of the known mannanases and the optimal pH is also the lowest except those of fungi. Even at 0-5 degrees C, this enzyme retained 20-40% of its maximum activity. Divalent metal ions such as Ca2+, Mg2+, Cu2+, and Zn2+ enhanced the enzyme activity, but Mn2+, Hg2+, and Ag+ inhibited activity. This study represents the first record of a P-mannanase from an arthropod and provides a new source of carbohydrate hydrolysis enzyme with novel characteristics. (C) 2008 Elsevier Inc. All rights reserved. -
dc.description.uri 1 -
dc.language English -
dc.publisher ELSEVIER SCIENCE INC -
dc.subject MUSSEL MYTILUS-EDULIS -
dc.subject BETA-MANNANASES -
dc.subject SUBSTRATE-SPECIFICITY -
dc.subject SEQUENCE ALIGNMENT -
dc.subject CRYSTAL-STRUCTURE -
dc.subject PICHIA-PASTORIS -
dc.subject PURIFICATION -
dc.subject EXPRESSION -
dc.subject ENZYMES -
dc.subject ADAPTATION -
dc.title Molecular cloning and characterization of a novel cold-active beta-1,4-D-mannanase from the Antarctic springtail, Cryptopygus antarcticus -
dc.type Article -
dc.citation.endPage 40 -
dc.citation.startPage 32 -
dc.citation.title COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY -
dc.citation.volume 151 -
dc.citation.number 1 -
dc.contributor.alternativeName 송정민 -
dc.contributor.alternativeName 강성균 -
dc.contributor.alternativeName 김충곤 -
dc.contributor.alternativeName 이윤호 -
dc.identifier.bibliographicCitation COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, v.151, no.1, pp.32 - 40 -
dc.identifier.doi 10.1016/j.cbpb.2008.05.005 -
dc.identifier.scopusid 2-s2.0-47949132767 -
dc.identifier.wosid 000258904000004 -
dc.type.docType Article -
dc.description.journalClass 1 -
dc.subject.keywordPlus MUSSEL MYTILUS-EDULIS -
dc.subject.keywordPlus BETA-MANNANASES -
dc.subject.keywordPlus SUBSTRATE-SPECIFICITY -
dc.subject.keywordPlus SEQUENCE ALIGNMENT -
dc.subject.keywordPlus CRYSTAL-STRUCTURE -
dc.subject.keywordPlus PICHIA-PASTORIS -
dc.subject.keywordPlus PURIFICATION -
dc.subject.keywordPlus EXPRESSION -
dc.subject.keywordPlus ENZYMES -
dc.subject.keywordPlus ADAPTATION -
dc.subject.keywordAuthor Antarctic springtail -
dc.subject.keywordAuthor Cryptopygus antarcticus -
dc.subject.keywordAuthor beta-mannanase -
dc.subject.keywordAuthor cold activity -
dc.subject.keywordAuthor low pH activity -
dc.subject.keywordAuthor GH5 family -
dc.relation.journalWebOfScienceCategory Biochemistry & Molecular Biology -
dc.relation.journalWebOfScienceCategory Zoology -
dc.description.journalRegisteredClass scie -
dc.description.journalRegisteredClass scopus -
dc.relation.journalResearchArea Biochemistry & Molecular Biology -
dc.relation.journalResearchArea Zoology -
Appears in Collections:
Ocean Climate Solutions Research Division > Ocean Climate Response & Ecosystem Research Department > 1. Journal Articles
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