Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii SCIE SCOPUS
DC Field | Value | Language |
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dc.contributor.author | Jiang, Yue | - |
dc.contributor.author | Peng, Yuxin | - |
dc.contributor.author | Shin, Hyeon Ho | - |
dc.contributor.author | Kim, Hyun Jung | - |
dc.contributor.author | Kim, Ki-Hyun | - |
dc.contributor.author | Jiang, Lingmin | - |
dc.contributor.author | Lee, Jiyoung | - |
dc.contributor.author | Li, Zhun | - |
dc.date.accessioned | 2022-02-22T02:30:01Z | - |
dc.date.available | 2022-02-22T02:30:01Z | - |
dc.date.created | 2022-02-22 | - |
dc.date.issued | 2022-03 | - |
dc.identifier.issn | 0302-8933 | - |
dc.identifier.uri | https://sciwatch.kiost.ac.kr/handle/2020.kiost/42362 | - |
dc.description.abstract | A bacterial strain, designated J12C1-MA-4T, was isolated from liquid culture of the dinoflagellate Ceratoperidinium margalefii. The bacterium was Gram-negative, aerobic, and rod-shaped. Oxidase and catalase were positive. Optimal growth was observed at 30 °C, pH 7.0, in the presence of 1% (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene and a 92 core gene set suggested that the strain J12C1-MA-4T belongs to the family Rhodobacteraceae in the class Alphaproteobacteria and represents a taxon separated from other genera. 16S rRNA gene sequence of the strain J12C1-MA-4T showed high similarities to Loktanella ponticola KCTC 42133T (95.7%), Pseudooctadecabacter jejudonensis KCTC 32525T (95.5%) and Jannaschia helgolandensis KCTC 12191T (95.3%). The genome length of strain J12C1-MA-4T was 3,621,968 bp with a DNA G + C content of 64.48 mol%. The major cellular fatty acids of strain J12C1-MA-4T were summed feature 8 (comprising C18:1ω7c and/or C18:1ω6c) (> 10%). Phosphatidylglycerol (PG), phosphatidylcholine (PC), phospholipids (PL), lipids 1 (L1) and aminolipid (AL) were shown to be the major polar lipids. The sole predominant isoprenoid quinone was Q-10. Based on phylogenetic, phenotypic, chemotaxonomic and genomic features, we propose that strain J12C1-MA-4T represent a novel species in the novel genus of the family Rhodobacteraceae, with the proposed name Gymnodinialimonas ceratoperidinii gen. nov., sp. nov.. The type strain is J12C1-MA-4T (=KCTC 82770T =GDMCC 1.2729T). | - |
dc.description.uri | 1 | - |
dc.language | English | - |
dc.publisher | Springer Verlag | - |
dc.title | Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii | - |
dc.type | Article | - |
dc.citation.startPage | 185 | - |
dc.citation.title | Archives of Microbiology | - |
dc.citation.volume | 204 | - |
dc.citation.number | 3 | - |
dc.contributor.alternativeName | 신현호 | - |
dc.contributor.alternativeName | 김현정 | - |
dc.identifier.bibliographicCitation | Archives of Microbiology, v.204, no.3, pp.185 | - |
dc.identifier.doi | 10.1007/s00203-022-02797-x | - |
dc.identifier.scopusid | 2-s2.0-85124919422 | - |
dc.identifier.wosid | 000757927300001 | - |
dc.type.docType | Article | - |
dc.description.journalClass | 1 | - |
dc.description.isOpenAccess | N | - |
dc.subject.keywordAuthor | Dinoflagellate | - |
dc.subject.keywordAuthor | 16S rRNA | - |
dc.subject.keywordAuthor | gene Phylogeny | - |
dc.subject.keywordAuthor | Polyphasic taxonomy | - |
dc.subject.keywordAuthor | Whole genome | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.relation.journalResearchArea | Microbiology | - |