Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii SCIE SCOPUS

DC Field Value Language Jiang, Yue - Peng, Yuxin - Shin, Hyeon Ho - Kim, Hyun Jung - Kim, Ki-Hyun - Jiang, Lingmin - Lee, Jiyoung - Li, Zhun - 2022-02-22T02:30:01Z - 2022-02-22T02:30:01Z - 2022-02-22 - 2022-03 -
dc.identifier.issn 0302-8933 -
dc.identifier.uri -
dc.description.abstract A bacterial strain, designated J12C1-MA-4T, was isolated from liquid culture of the dinoflagellate Ceratoperidinium margalefii. The bacterium was Gram-negative, aerobic, and rod-shaped. Oxidase and catalase were positive. Optimal growth was observed at 30 °C, pH 7.0, in the presence of 1% (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene and a 92 core gene set suggested that the strain J12C1-MA-4T belongs to the family Rhodobacteraceae in the class Alphaproteobacteria and represents a taxon separated from other genera. 16S rRNA gene sequence of the strain J12C1-MA-4T showed high similarities to Loktanella ponticola KCTC 42133T (95.7%), Pseudooctadecabacter jejudonensis KCTC 32525T (95.5%) and Jannaschia helgolandensis KCTC 12191T (95.3%). The genome length of strain J12C1-MA-4T was 3,621,968 bp with a DNA G + C content of 64.48 mol%. The major cellular fatty acids of strain J12C1-MA-4T were summed feature 8 (comprising C18:1ω7c and/or C18:1ω6c) (> 10%). Phosphatidylglycerol (PG), phosphatidylcholine (PC), phospholipids (PL), lipids 1 (L1) and aminolipid (AL) were shown to be the major polar lipids. The sole predominant isoprenoid quinone was Q-10. Based on phylogenetic, phenotypic, chemotaxonomic and genomic features, we propose that strain J12C1-MA-4T represent a novel species in the novel genus of the family Rhodobacteraceae, with the proposed name Gymnodinialimonas ceratoperidinii gen. nov., sp. nov.. The type strain is J12C1-MA-4T (=KCTC 82770T =GDMCC 1.2729T). -
dc.description.uri 1 -
dc.language English -
dc.publisher Springer Verlag -
dc.title Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii -
dc.type Article -
dc.citation.startPage 185 -
dc.citation.title Archives of Microbiology -
dc.citation.volume 204 -
dc.citation.number 3 -
dc.contributor.alternativeName 신현호 -
dc.contributor.alternativeName 김현정 -
dc.identifier.bibliographicCitation Archives of Microbiology, v.204, no.3, pp.185 -
dc.identifier.doi 10.1007/s00203-022-02797-x -
dc.identifier.scopusid 2-s2.0-85124919422 -
dc.identifier.wosid 000757927300001 -
dc.type.docType Article -
dc.description.journalClass 1 -
dc.description.isOpenAccess N -
dc.subject.keywordAuthor Dinoflagellate -
dc.subject.keywordAuthor 16S rRNA -
dc.subject.keywordAuthor gene Phylogeny -
dc.subject.keywordAuthor Polyphasic taxonomy -
dc.subject.keywordAuthor Whole genome -
dc.relation.journalWebOfScienceCategory Microbiology -
dc.description.journalRegisteredClass scie -
dc.description.journalRegisteredClass scopus -
dc.relation.journalResearchArea Microbiology -
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South Sea Research Institute > Library of Marine Samples > 1. Journal Articles
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