Molecular and biochemical characterizations of a novel arthropod endo-beta-1,3-glucanase from the Antarctic springtail, Cryptopygus antarcticus, horizontally acquired from bacteria SCIE SCOPUS

DC Field Value Language
dc.contributor.author Song, Jung Min -
dc.contributor.author Nam, Kiwoong -
dc.contributor.author Sun, Young-Uk -
dc.contributor.author Kang, Mee Hye -
dc.contributor.author Kim, Choong-Gon -
dc.contributor.author Kwon, Suk-Tae -
dc.contributor.author Lee, Jehee -
dc.contributor.author Lee, Youn-Ho -
dc.date.accessioned 2021-03-17T08:27:45Z -
dc.date.accessioned 2021-03-17T08:27:45Z -
dc.date.available 2021-03-17T08:27:45Z -
dc.date.available 2021-03-17T08:27:45Z -
dc.date.created 2020-01-28 -
dc.date.issued 2010-04 -
dc.identifier.issn 1096-4959 -
dc.identifier.uri https://sciwatch.kiost.ac.kr/handle/2020.kiost/40456 -
dc.description.abstract Collembolan species have been known to have beta,1,3-glucanase activity and yet the genes coding such enzymes have not been demonstrated. We report here a novel arthropod endo-beta-1,3-glucanase gene CaLam from the Antarctic springtail, Cryptopygus antarcticus. The open reading frame consists of 813 bp encoding 270 amino acids with a putative signal peptide and a typical motif of glycosyl hydrolase family 16 (GHF16), E-I-D-I-T-E. The recombinant protein expressed in E. coli shows the hydrolytic activity toward laminarin (K-m similar to 9.98 mg/mL) with an optimal temperature 50 degrees C and an optimal pH 6.0. CaLam digests laminarin and laminarioligosaccharides except laminaribiose as an endo-beta-1,3-glucanase, releasing glucose, laminaribiose and laminaritriose as the major products. Analyses of molecular phylogeny of CaLam and its protein structure reveal that CaLam is closely related with bacterial beta-1,3-glucanases more than with the eukaryotic homologues. Even so, the genomic structure of the CaLam gene consisting of six exons interspersed with approximately 57 to 63 bp introns confirms that it is endogenous in the genome of the Antarctic springtail. These results suggest that CaLam should have been transferred from bacteria to the lineage of the Collembolan species by horizontal gene transfer. (C) 2010 Elsevier Inc. All rights reserved. -
dc.description.uri 1 -
dc.language English -
dc.publisher ELSEVIER SCIENCE INC -
dc.subject BETA-1,3-GLUCAN RECOGNITION PROTEIN -
dc.subject HALIOTIS-DISCUS-HANNAI -
dc.subject CDNA CLONING -
dc.subject DIGESTIVE ENZYMES -
dc.subject BINDING-PROTEIN -
dc.subject MANDUCA-SEXTA -
dc.subject GENE-TRANSFER -
dc.subject PURIFICATION -
dc.subject ENDO-1,3-BETA-D-GLUCANASE -
dc.subject LIPOPOLYSACCHARIDE -
dc.title Molecular and biochemical characterizations of a novel arthropod endo-beta-1,3-glucanase from the Antarctic springtail, Cryptopygus antarcticus, horizontally acquired from bacteria -
dc.type Article -
dc.citation.endPage 412 -
dc.citation.startPage 403 -
dc.citation.title COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY -
dc.citation.volume 155 -
dc.citation.number 4 -
dc.contributor.alternativeName 강미혜 -
dc.contributor.alternativeName 김충곤 -
dc.contributor.alternativeName 이윤호 -
dc.identifier.bibliographicCitation COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY, v.155, no.4, pp.403 - 412 -
dc.identifier.doi 10.1016/j.cbpb.2010.01.003 -
dc.identifier.scopusid 2-s2.0-77949325065 -
dc.identifier.wosid 000276184900008 -
dc.type.docType Article -
dc.description.journalClass 1 -
dc.subject.keywordPlus BETA-1,3-GLUCAN RECOGNITION PROTEIN -
dc.subject.keywordPlus HALIOTIS-DISCUS-HANNAI -
dc.subject.keywordPlus CDNA CLONING -
dc.subject.keywordPlus DIGESTIVE ENZYMES -
dc.subject.keywordPlus BINDING-PROTEIN -
dc.subject.keywordPlus MANDUCA-SEXTA -
dc.subject.keywordPlus GENE-TRANSFER -
dc.subject.keywordPlus PURIFICATION -
dc.subject.keywordPlus ENDO-1,3-BETA-D-GLUCANASE -
dc.subject.keywordPlus LIPOPOLYSACCHARIDE -
dc.subject.keywordAuthor Endo-beta-1,3-glucanase -
dc.subject.keywordAuthor Laminarinase -
dc.subject.keywordAuthor Antarctic springtail -
dc.subject.keywordAuthor Cryptopygus antarcticus -
dc.subject.keywordAuthor Glycosyl hydrolase family 16 (GHF16) -
dc.subject.keywordAuthor Horizontal gene transfer -
dc.relation.journalWebOfScienceCategory Biochemistry & Molecular Biology -
dc.relation.journalWebOfScienceCategory Zoology -
dc.description.journalRegisteredClass scie -
dc.description.journalRegisteredClass scopus -
dc.relation.journalResearchArea Biochemistry & Molecular Biology -
dc.relation.journalResearchArea Zoology -
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Ocean Climate Solutions Research Division > Ocean Climate Response & Ecosystem Research Department > 1. Journal Articles
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