Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov. SCIE SCOPUS KCI
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Kim, Yun Jae | - |
dc.contributor.author | Yang, Jhung-Ahn | - |
dc.contributor.author | Lim, Jae Kyu | - |
dc.contributor.author | Park, Mi-Jeong | - |
dc.contributor.author | Yang, Sung-Hyun | - |
dc.contributor.author | Lee, Hyun Sook | - |
dc.contributor.author | Kang, Sung Gyun | - |
dc.contributor.author | Lee, Jung-Hyun | - |
dc.contributor.author | Kwon, Kae Kyoung | - |
dc.date.accessioned | 2020-12-10T07:52:53Z | - |
dc.date.available | 2020-12-10T07:52:53Z | - |
dc.date.created | 2020-05-08 | - |
dc.date.issued | 2020-04 | - |
dc.identifier.issn | 1225-8873 | - |
dc.identifier.uri | https://sciwatch.kiost.ac.kr/handle/2020.kiost/38703 | - |
dc.description.abstract | An anaerobic, rod-shaped, mesophilic, chemolithoautotrophic, sulfate-reducing bacterial strain IOR2(T) was isolated from a newly found deep-sea hydrothermal vent (OVF, Onnuri Vent Field) area in the central Indian Ocean ridge (11 degrees 24 ' 88 '' S 66 degrees 25 ' 42 '' E, 2021 m water depth). The 16S rRNA gene sequence analysis revealed that the strain IOR2(T) was most closely related to Desulfovibrio senegalensis BLaC1(T) (96.7%). However, it showed low similarity with the members of the family Desulfovibrionaceae, such as Desulfovibrio tunisiensis RB22(T) (94.0%), D. brasiliensis LVform1(T) (93.9%), D. halophilus DSM 5663(T) (93.7%), and Pseudodesulfovibrio aespoeensis Aspo-2(T) (93.2%). The strain IOR2(T) could grow at 23-42 degrees C (optimum 37 degrees C), pH 5.0-8.0 (optimum pH 7.0) and with 0.5-6.5% (optimum 3.0%) NaCl. The strain could use lactate, pyruvate, H-2, and glycerol as electron donors and sulfate, thiosulfate, and sulfite as electron acceptors. The major fatty acids of the strain IOR2(T) were iso-C-15:0, iso-C-17:0, ante-iso-C-15:0, and summed feature 9 (C-16:0 methyl/iso-C-17:1 omega 9c). Both the strains IOR2(T) and BLaC1(T) could grow with CO2 and H-2 as the sole sources of carbon and energy, respectively. Genomic evidence for the Wood-Ljungdahl pathway in both the strains reflects chemolithoautotrophic growth. The DNA G + C content of the strain IOR2(T) and BLaC1(T) was 58.1-60.5 mol%. Based on the results of the phylogenetic and physiologic studies, Paradesulfovibrio onnuriensis gen. nov., sp. nov. with the type strain IOR2(T) (= KCTC 15845(T) = MCCC 1K04559(T)) was proposed to be a member of the family Desulfovibrionaceae. We have also proposed the reclassification of D. senegalensis as Paradesulfovibrio senegalensis comb. nov. | - |
dc.description.uri | 1 | - |
dc.language | English | - |
dc.publisher | MICROBIOLOGICAL SOCIETY KOREA | - |
dc.title | Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov. | - |
dc.type | Article | - |
dc.citation.endPage | 259 | - |
dc.citation.startPage | 252 | - |
dc.citation.title | JOURNAL OF MICROBIOLOGY | - |
dc.citation.volume | 58 | - |
dc.citation.number | 4 | - |
dc.contributor.alternativeName | 김윤재 | - |
dc.contributor.alternativeName | 양정안 | - |
dc.contributor.alternativeName | 임재규 | - |
dc.contributor.alternativeName | 박미정 | - |
dc.contributor.alternativeName | 양성현 | - |
dc.contributor.alternativeName | 이현숙 | - |
dc.contributor.alternativeName | 강성균 | - |
dc.contributor.alternativeName | 이정현 | - |
dc.contributor.alternativeName | 권개경 | - |
dc.identifier.bibliographicCitation | JOURNAL OF MICROBIOLOGY, v.58, no.4, pp.252 - 259 | - |
dc.identifier.doi | 10.1007/s12275-020-9376-0 | - |
dc.identifier.scopusid | 2-s2.0-85080976936 | - |
dc.identifier.wosid | 000516784200004 | - |
dc.type.docType | Article | - |
dc.identifier.kciid | ART002573591 | - |
dc.description.journalClass | 1 | - |
dc.description.isOpenAccess | N | - |
dc.subject.keywordPlus | MAXIMUM-LIKELIHOOD | - |
dc.subject.keywordPlus | GENOME SEQUENCE | - |
dc.subject.keywordPlus | WATER | - |
dc.subject.keywordPlus | CLASSIFICATION | - |
dc.subject.keywordPlus | SEDIMENT | - |
dc.subject.keywordAuthor | Paradesulfovibrio onnuriensis | - |
dc.subject.keywordAuthor | sulfate-reducing bacteria | - |
dc.subject.keywordAuthor | deep-sea sediment | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.description.journalRegisteredClass | kci | - |
dc.relation.journalResearchArea | Microbiology | - |