Differentially displayed genes with oxygen depletion stress and transcriptional responses in the marine mussel, Mytilus galloprovincialis SCIE SCOPUS

DC Field Value Language
dc.contributor.author Woo, Seonock -
dc.contributor.author Jeon, Hye-Young -
dc.contributor.author Kim, Seong-Ryul -
dc.contributor.author Yum, Seungshic -
dc.date.accessioned 2020-04-20T07:25:40Z -
dc.date.available 2020-04-20T07:25:40Z -
dc.date.created 2020-01-28 -
dc.date.issued 2011-12 -
dc.identifier.issn 1744-117X -
dc.identifier.uri https://sciwatch.kiost.ac.kr/handle/2020.kiost/3794 -
dc.description.abstract Hypoxic events affecting aquatic environments have been reported worldwide and the hypoxia caused by eutrophication is considered one of the serious threats to coastal marine ecosystems. To investigate the molecular-level responses of marine organisms exposed to oxygen depletion stress and to explore the differentially expressed genes induced or repressed by hypoxia, differential display polymerase chain reaction (DD-PCR) was used with mRNAs from the marine mussel, Mytilus galloprovincialis, under oxygen depletion and normal oxygen conditions. In total, 107 cDNA clones were differentially expressed under hypoxic conditions relative to the control mussel group. The differentially expressed genes were analyzed to determine the effects of hypoxia. They were classified into five functional categories: information storage and processing, cellular processes and signaling, metabolism, predicted general function only, and function unknown. The differentially expressed genes were predominantly associated with cellular processing and signaling, and they were particularly related to the signal transduction mechanism, posttranslational modification, and chaperone functions. The observed differences in the DD-PCR of 10 genes (encoding elongation factor 1 alpha, heat shock protein 90, calcium/calmodulin-dependent protein kinase II, GTPase-activating protein, 18S ribosomal RNA, cytochrome oxidase subunit 1, ATP synthase, chitinase, phosphoglycerate/bisphosphoglycerate mutase family protein, and the nicotinic acetylcholine receptor) were confirmed by quantitative RT-PCR and their transcriptional changes in the mussels exposed to hypoxic conditions for 24-72 h were investigated. These results identify biomarker genes for hypoxic stress and provide molecular-level information about the effects of oxygen depletion on marine bivalves. (C) 2011 Elsevier Inc. All rights reserved. -
dc.description.uri 1 -
dc.language English -
dc.publisher ELSEVIER SCIENCE INC -
dc.subject OYSTER CRASSOSTREA-GIGAS -
dc.subject INDUCED APOPTOSIS -
dc.subject CELL-CYCLE -
dc.subject HYPOXIA -
dc.subject EXPRESSION -
dc.subject RESPIRATION -
dc.subject CONSUMPTION -
dc.subject ELONGATION -
dc.subject TOLERANCE -
dc.subject INDICATOR -
dc.title Differentially displayed genes with oxygen depletion stress and transcriptional responses in the marine mussel, Mytilus galloprovincialis -
dc.type Article -
dc.citation.endPage 356 -
dc.citation.startPage 348 -
dc.citation.title COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS -
dc.citation.volume 6 -
dc.citation.number 4 -
dc.contributor.alternativeName 우선옥 -
dc.contributor.alternativeName 전혜영 -
dc.contributor.alternativeName 김성렬 -
dc.contributor.alternativeName 염승식 -
dc.identifier.bibliographicCitation COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, v.6, no.4, pp.348 - 356 -
dc.identifier.doi 10.1016/j.cbd.2011.07.003 -
dc.identifier.scopusid 2-s2.0-80755136720 -
dc.identifier.wosid 000297884300002 -
dc.type.docType Article -
dc.description.journalClass 1 -
dc.subject.keywordPlus OYSTER CRASSOSTREA-GIGAS -
dc.subject.keywordPlus INDUCED APOPTOSIS -
dc.subject.keywordPlus CELL-CYCLE -
dc.subject.keywordPlus HYPOXIA -
dc.subject.keywordPlus EXPRESSION -
dc.subject.keywordPlus RESPIRATION -
dc.subject.keywordPlus CONSUMPTION -
dc.subject.keywordPlus ELONGATION -
dc.subject.keywordPlus TOLERANCE -
dc.subject.keywordPlus INDICATOR -
dc.subject.keywordAuthor Mytilus galloprovincialis -
dc.subject.keywordAuthor Hypoxia -
dc.subject.keywordAuthor Differential gene expression -
dc.subject.keywordAuthor DD-PCR -
dc.subject.keywordAuthor Gene ontology -
dc.relation.journalWebOfScienceCategory Biochemistry & Molecular Biology -
dc.relation.journalWebOfScienceCategory Genetics & Heredity -
dc.description.journalRegisteredClass scie -
dc.description.journalRegisteredClass scopus -
dc.relation.journalResearchArea Biochemistry & Molecular Biology -
dc.relation.journalResearchArea Genetics & Heredity -
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