Identification of genes in soft coral Scleronephthya gracillimum using next generation sequencing

Title
Identification of genes in soft coral Scleronephthya gracillimum using next generation sequencing
Author(s)
우선옥; 염승식
KIOST Author(s)
Yum, Seungshic(염승식)
Publication Year
2018-08-13
Abstract
The soft coral Scleronephthya gracillimum is a colonial azooxanthellate coral being dominant in Seoguipo, Jeju Island, Korea (33°24N, 126°32E). This coral contributes to the survival and maintenance of the overall biological community in this area by offering a wide variety of habitats for benthic marine animals. Ultimately we aimed the construction of cDNA chip from this soft coral species for the health assessment using its transcriptional changes and we identified the soft coral genes using next generation sequencing (NGS) and searched their gene functions using BLAST algorithm and classified the functional categories based on KOG classification. in this area by offering a wide variety of habitats for benthic marine animals. Ultimately we aimed the construction of cDNA chip from this soft coral species for the health assessment using its transcriptional changes and we identified the soft coral genes using next generation sequencing (NGS) and searched their gene functions using BLAST algorithm and classified the functional categories based on KOG classification.
URI
https://sciwatch.kiost.ac.kr/handle/2020.kiost/23173
Bibliographic Citation
ADVANCES IN ENVIRONMENTAL SCIENCE AND ENGINEERING RESEARCH INTERNATIONAL CONFERENCE, pp.17 - 23, 2018
Publisher
AESERIC
Type
Conference
Language
English
Publisher
AESERIC
Related Researcher
Research Interests

Marine Genomics,Environmental Genomics,Novel biomaterials,해양생물유전체,생태환경유전체,바이오신소재

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