Identification of genes in soft coral Scleronephthya gracillimum using next generation sequencing
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Title
- Identification of genes in soft coral Scleronephthya gracillimum using next generation sequencing
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Author(s)
- 우선옥; 염승식
- KIOST Author(s)
- Woo, Seon Ock(우선옥); Yum, Seung Shic(염승식)
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Alternative Author(s)
- 우선옥; 염승식
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Publication Year
- 2018-08-13
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Abstract
- The soft coral Scleronephthya gracillimum is a colonial azooxanthellate coral being dominant in Seoguipo, Jeju Island, Korea (33°24N, 126°32E). This coral contributes to the survival and maintenance of the overall biological community in this area by offering a wide variety of habitats for benthic marine animals. Ultimately we aimed the construction of cDNA chip from this soft coral species for the health assessment using its transcriptional changes and we identified the soft coral genes using next generation sequencing (NGS) and searched their gene functions using BLAST algorithm and classified the functional categories based on KOG classification. in this area by offering a wide variety of habitats for benthic marine animals. Ultimately we aimed the construction of cDNA chip from this soft coral species for the health assessment using its transcriptional changes and we identified the soft coral genes using next generation sequencing (NGS) and searched their gene functions using BLAST algorithm and classified the functional categories based on KOG classification.
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URI
- https://sciwatch.kiost.ac.kr/handle/2020.kiost/23173
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Bibliographic Citation
- ADVANCES IN ENVIRONMENTAL SCIENCE AND ENGINEERING RESEARCH INTERNATIONAL CONFERENCE, pp.17 - 23, 2018
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Publisher
- AESERIC
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Type
- Conference
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Language
- English
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