Complete mitochondrial genome of Sebastes vulpes (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea

Title
Complete mitochondrial genome of Sebastes vulpes (Scorpaenidae, Scorpaeniformes) from the East Sea, Korea
Author(s)
장요순; 오승용; 이은경; 명정구; JEONG-HO PARK; KI-YONG KIM; 김성
KIOST Author(s)
Oh, Sung Yong(오승용)Lee, Eun Kyung(이은경)Myoung, Jung Goo(명정구)Kim, Sung(김성)
Publication Year
2014-11-28
Abstract
Sebastes vulpes is considered a valid species despite the presence of extensive hybrids. To obtain the basic genetic intraspecific structure, we analysed the complete mitogenome of S. vulpes using next-generation sequencing. The complete mitogenome was 16,462 bp in length containing 13 protein-coding genes (PCGs), two rRNAs, 22 tRNAs and one control region. The complete mitogenome comprised 27.7% A, 26.5% T, 17.1% G and 28.6% C, showing a minor AT bias (54.3%). The initial codon in all PCGs was ATG, excluding COX1 (GTG). The majority of stop codons in the PCGs were TAA, excluding ND1 and ND3 (TAG), ND4 (AGA) and Cytb (incomplete termination codon, T). All tRNAs had a typical cloverleaf structure, excluding tRNASer (AGY), which lacked the DHU arm. The complete mitogenome of S. vulpes can be used to study hybridisation and on-going speciation.togenome was 16,462 bp in length containing 13 protein-coding genes (PCGs), two rRNAs, 22 tRNAs and one control region. The complete mitogenome comprised 27.7% A, 26.5% T, 17.1% G and 28.6% C, showing a minor AT bias (54.3%). The initial codon in all PCGs was ATG, excluding COX1 (GTG). The majority of stop codons in the PCGs were TAA, excluding ND1 and ND3 (TAG), ND4 (AGA) and Cytb (incomplete termination codon, T). All tRNAs had a typical cloverleaf structure, excluding tRNASer (AGY), which lacked the DHU arm. The complete mitogenome of S. vulpes can be used to study hybridisation and on-going speciation.
URI
https://sciwatch.kiost.ac.kr/handle/2020.kiost/20547
Bibliographic Citation
Mitochondrial DNA, pp.1 - 2, 2014
Publisher
Informa
Type
Conference
Language
English
Publisher
Informa
Related Researcher
Research Interests

Fish ecology,Eggs & larval fish identification,어류 생태연구,난자치어 형태분류

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